PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057109.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 279aa    MW: 32110 Da    PI: 9.3699
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.52.5e-1931103175
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgk 75 
                     +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r  +k++   ++++r+e rtgC+a+l++k +++ k
  XP_028057109.1  31 DFYNTYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRNMK 103
                     6********************9.6666****************9999.999*****************9887655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NMKISASQAT EIDLAEKSGI  120
RLNAAFELMG NEVGGRESLG FTKLDQKNYL RTKRQNSLAY GEAGSILQYF RDKSLENPSF  180
FYSVQLDNEE QITNIFWADA QMIMDYGQFG DVVTFDTTYK LNSAHRPFAS FVGFNHHRET  240
VIFGAALMYI LKRWTKKVLY GRGRGRGRGH GDVDHTPTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-51FAR1 family protein