PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057156.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 276aa    MW: 29833.3 Da    PI: 8.4808
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.000491621981354
                     HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R+++ +++  L++l+ +      +K + a++L +A+ YI+ L
  XP_028057156.1 162 REKLGERITALQQLVSPY-----GKTDTASVLHEAMGYIRFL 198
                     78888999*******999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MPTLSLLKKT RLFDLKVSSM ADSEGSSIAG GSFSQLLFAD DDVGLDTDGC YNYTSSFSTE  60
NPPKMLCFGD YNRIGSDVGV SETTTRTAQK SRLTCSDSSS ASSTTSTSTT TLSKANKRRN  120
GLGNQSIQSF IAGIRAPAGS QRNCKKTKSE NSTVTGHGKV KREKLGERIT ALQQLVSPYG  180
KTDTASVLHE AMGYIRFLHD QVHVLCSPYL ERLSSSTLLL HRPPPEEGEN GEGNSRKDLR  240
SRGLCLVPIE CTEHIANNNG ADFWSPAMGN NVSPKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.12e-45bHLH family protein