PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057167.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 528aa MW: 57836 Da PI: 5.8918

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.4e-11	345	387	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_028057167.1 345 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 387 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MLPIVNGMVW MEDRGDEETP SWAAQNNNNG CIVDKKDELG SLSTFKSMLG VEDEDWYVNT 60 NNNNTILTFP SNFTESDNNL LLQSVGSSSS CSPSSASVFT NLDPSQEQFF LPSKPSISSV 120 LNPISNNPLD HSFDLGCETG FLQTHSLTSL NRGGGILTGF TDLTSQSLMG THNLALDPQF 180 SNTHSLQLTG STSFRGFQEE GFGNPLFLNR SKMLKPLQNF TSIGAQPTLF QKRAALRKNL 240 ANNGTNLGVL GTERGGISSN VQGYSGKMEV SEVNEKKKRK YSIGEDVEDV SLDGSGLNYD 300 SDEFMENNKV EESGKNGGNS SNANSTVTGG DQKGKKRGLP AKNLMAERRR RKKLNDRLYM 360 LRSVVPKISK MDRASILGDA IEYLKELLQK IKDLHNELES NPPGSSLTPT STSFYPLTPT 420 PHSLPCHIKE ELCPSSLPSP NGLPARVEVR LSEGRAVNIH MFCSRRPGLL LSTMRALENL 480 GLDIQQAVIS CFNGFAMDIF RAEQCREGQD VHPDQIKAVL LDSAGFMM

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MLPIVNGMVW MEDRGDEETP SWAAQNNNNG CIVDKKDELG SLSTFKSMLG VEDEDWYVNT  60
NNNNTILTFP SNFTESDNNL LLQSVGSSSS CSPSSASVFT NLDPSQEQFF LPSKPSISSV  120
LNPISNNPLD HSFDLGCETG FLQTHSLTSL NRGGGILTGF TDLTSQSLMG THNLALDPQF  180
SNTHSLQLTG STSFRGFQEE GFGNPLFLNR SKMLKPLQNF TSIGAQPTLF QKRAALRKNL  240
ANNGTNLGVL GTERGGISSN VQGYSGKMEV SEVNEKKKRK YSIGEDVEDV SLDGSGLNYD  300
SDEFMENNKV EESGKNGGNS SNANSTVTGG DQKGKKRGLP AKNLMAERRR RKKLNDRLYM  360
LRSVVPKISK MDRASILGDA IEYLKELLQK IKDLHNELES NPPGSSLTPT STSFYPLTPT  420
PHSLPCHIKE ELCPSSLPSP NGLPARVEVR LSEGRAVNIH MFCSRRPGLL LSTMRALENL  480
GLDIQQAVIS CFNGFAMDIF RAEQCREGQD VHPDQIKAVL LDSAGFMM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	353	KKRGLPAKNLMAERRRRKK
2	347	354	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-133	bHLH family protein