PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057244.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 455aa MW: 50977.6 Da PI: 9.6995

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.4e-08	131	171	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eE ++l d+++++ + + Ia +++ Rt +q+k+r++ XP_028057244.1 131 WTKEETDQLFDLCERFDLR-FVVIADRFPSSRTVEQLKDRYY 171 *****************.*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MDAKDILGLP RTPLPLPQEK KSRPQKDSQR KPDGISREVY ALIGGLAPLM PSIDVAQLKR 60 RTQSENEKIT WQWLPFSNSA RKDNLQLYHW VRVVNAVPPT GDYSFAKYNK SVDIVKYTDE 120 EYEKHLTDPM WTKEETDQLF DLCERFDLRF VVIADRFPSS RTVEQLKDRY YSASRAILIS 180 RASSPGDVSG HPIVKEPYNV SQEIERKRSL SMVLSQTKQQ ERKDAEVLAE AKKISESCMA 240 ARGAEESELP VTSNVDAEGT ERAIVPVDTT SPSSSVQFAS ANVAPPTSIA ESASVATSLR 300 VLRVYTRTYA LDQMVQAASS SAGLRTIKRV EQTLQDLGVN LKPKVPTKAV CAEHLELRKE 360 ILTLLNLQKQ LQNKEAEGSS YRDGSYAETP NTPKRFQRVV DQDRTFIPEP FSFGGERNPV 420 GKRDQKRKAP GRLSDAPSSP AQSNKRPRKL KASDG

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MDAKDILGLP RTPLPLPQEK KSRPQKDSQR KPDGISREVY ALIGGLAPLM PSIDVAQLKR  60
RTQSENEKIT WQWLPFSNSA RKDNLQLYHW VRVVNAVPPT GDYSFAKYNK SVDIVKYTDE  120
EYEKHLTDPM WTKEETDQLF DLCERFDLRF VVIADRFPSS RTVEQLKDRY YSASRAILIS  180
RASSPGDVSG HPIVKEPYNV SQEIERKRSL SMVLSQTKQQ ERKDAEVLAE AKKISESCMA  240
ARGAEESELP VTSNVDAEGT ERAIVPVDTT SPSSSVQFAS ANVAPPTSIA ESASVATSLR  300
VLRVYTRTYA LDQMVQAASS SAGLRTIKRV EQTLQDLGVN LKPKVPTKAV CAEHLELRKE  360
ILTLLNLQKQ LQNKEAEGSS YRDGSYAETP NTPKRFQRVV DQDRTFIPEP FSFGGERNPV  420
GKRDQKRKAP GRLSDAPSSP AQSNKRPRKL KASDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein