PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057252.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 150aa    MW: 16949.9 Da    PI: 4.763
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB50.26.3e-168103494
           NF-YB   4 qdrflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                     + ++lP a v r++k+ l    +++ is  ++a +   e +  fi ++++ a+d c++ kr+tin+dd++ al ++ f ++v plk+ l+++r+ 
  XP_028057252.1   8 ETEELPKAIVRRVVKEKLSqlsNDGDISvfREALQAFSESARIFIHYLSATANDICKESKRQTINADDVFKALEEIEFPEFVGPLKASLEEFRQK 102
                     56789**********976522157777744799************************************************************86 PP

           NF-YB  94 e 94 
                     +
  XP_028057252.1 103 N 103
                     5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MAEKVVAETE ELPKAIVRRV VKEKLSQLSN DGDISVFREA LQAFSESARI FIHYLSATAN  60
DICKESKRQT INADDVFKAL EEIEFPEFVG PLKASLEEFR QKNAGKRSAY KAKEANKKKE  120
KVTPVENGGE DKQDNRDEMN EDENNTPAND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.15e-43NF-YB family protein