PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057520.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 184aa    MW: 21248.8 Da    PI: 6.0389
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.91.2e-1137104272
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                     fY +YAk+vGFs+  ++++   ++g+ ++    Cs+ g+r+++++   +  +++ +t++gCka+  ++ ++
  XP_028057520.1  37 FYVAYAKHVGFSIAHRAQHFG-DDGQLKNFAIECSRAGERKKKSEV--NPLKPSLSTKIGCKARRILEIND 104
                     9*************9988776.8999**************998766..999************97666654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MEIDSNDVDN PSVNEVEQLE EPKKGMCFSS REEVYTFYVA YAKHVGFSIA HRAQHFGDDG  60
QLKNFAIECS RAGERKKKSE VNPLKPSLST KIGCKARRIL EINDQAGIGV SRNYHSMVVE  120
AGGYESLTFD ERDARNYINR ARRLRLGEGD VESLQSYFMW MQAHSEKFFY VIDVDEEFRI  180
RNLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-12FAR1 family protein