PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057561.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 643aa MW: 74980.8 Da PI: 6.2938

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.3	4.5e-22	83	173	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs+rk + +k+k+++eit+rt+vC+keg+r +k++ + +r+e r+gC a+l k+++ gk++ ++++++HnH+l+p XP_028057561.1 83 DFYNTYSGKVGFSIRKLYVHKNKHTKEITSRTLVCYKEGTRGIDKRD-PLVKFPRQEVRCGCGARLSFKLDRnLGKYVAIDFVEHHNHDLVP 173 6*****************************************999.88999**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MVEEGDSDGE RLAEGREFGC DATIAEGRKS DCDATAGRRH CSHDEIIGCT EVIEENNVVD 60 ELANCGWKPK LGMSFDSEQA VYDFYNTYSG KVGFSIRKLY VHKNKHTKEI TSRTLVCYKE 120 GTRGIDKRDP LVKFPRQEVR CGCGARLSFK LDRNLGKYVA IDFVEHHNHD LVPQECIHML 180 PFQRKISTTQ AIEVELASES EIPLRSAYEL FGRESGRRSS LGFTKLDQKN YLRSKRQKDL 240 EYGEAGSVLQ YFHKKTLENP SFYYAVQLDY EEQISNIFWA DAQMIMDYAQ FGDVVTFDTT 300 YKLNNEHRPF GTFVGFNHHR ETVIFGAALM YDETAESFTW LFQIFLKHVS SLFEDVGVKG 360 VFSKFMHQID DDEEFKVQWD QMLDRYDAHN NHWLEQTFGV NEKWGWPYIM NSWAAGMSTT 420 QLSESFNAFL KDYLNCDHNL MEFFKHFERV LYDKRYKELE AEYNLCQKLP RVSIPTVMLK 480 QMADIYTKII FEEFQNEYIQ SIEASIVGTI HDGESTIFTI QTDVDEKKDK NVTMDRDGFL 540 SCSCKKFEVK GIVCQHCLKV LKEIINAKDL SAQYILKRWT KKARTESVKD RRGYDVKADV 600 KLHQSDRYRS LMNMFRAIAS RAVESEETYH LLLTKGEERY LKR

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MVEEGDSDGE RLAEGREFGC DATIAEGRKS DCDATAGRRH CSHDEIIGCT EVIEENNVVD  60
ELANCGWKPK LGMSFDSEQA VYDFYNTYSG KVGFSIRKLY VHKNKHTKEI TSRTLVCYKE  120
GTRGIDKRDP LVKFPRQEVR CGCGARLSFK LDRNLGKYVA IDFVEHHNHD LVPQECIHML  180
PFQRKISTTQ AIEVELASES EIPLRSAYEL FGRESGRRSS LGFTKLDQKN YLRSKRQKDL  240
EYGEAGSVLQ YFHKKTLENP SFYYAVQLDY EEQISNIFWA DAQMIMDYAQ FGDVVTFDTT  300
YKLNNEHRPF GTFVGFNHHR ETVIFGAALM YDETAESFTW LFQIFLKHVS SLFEDVGVKG  360
VFSKFMHQID DDEEFKVQWD QMLDRYDAHN NHWLEQTFGV NEKWGWPYIM NSWAAGMSTT  420
QLSESFNAFL KDYLNCDHNL MEFFKHFERV LYDKRYKELE AEYNLCQKLP RVSIPTVMLK  480
QMADIYTKII FEEFQNEYIQ SIEASIVGTI HDGESTIFTI QTDVDEKKDK NVTMDRDGFL  540
SCSCKKFEVK GIVCQHCLKV LKEIINAKDL SAQYILKRWT KKARTESVKD RRGYDVKADV  600
KLHQSDRYRS LMNMFRAIAS RAVESEETYH LLLTKGEERY LKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein