PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057606.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 749aa MW: 86302.5 Da PI: 4.9706

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.6	7.6e-22	142	225	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH + XP_028057606.1 142 NYYNCYAKELGFAIRVKSSWTKRNSREKRGAVLCCNCEGFKTIKEAS-----TRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLF 225 69**************************************98877.....8999*****************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MSGGFSPTDE PLSPTPDLDI TIEEGSENSE QPLEEEGSEH EIDSEEVFRI ESDDPGRGPV 60 LGIESNDLQK DGDQVLEFGS NDQVLRIESN HNENNSDQML EIESNYHEDG GDCDTTIDQN 120 GVKGYHPPVV GLEFESYDDA YNYYNCYAKE LGFAIRVKSS WTKRNSREKR GAVLCCNCEG 180 FKTIKEASTR RKETRTGCLA MIRLRLVESN RWRVDEVKLE HNHLFDPERA QNSKSHKKMD 240 AGAKRKLEPS IDVEVRTIKL YRTPVVDTAG YGSSSEREVS NHVDESKRLK LKKGDAQVIH 300 NYFCRLQLTN PNFFYVMDIN DEGHLRHLFW IEPRSRAAYG YFGDVVALDT TCMSSKYEVP 360 LVSFVGVNHH GQSILLGCGL LADETLETYV WLLRTWLTCM LGRPPQTILT DQCKALQTAI 420 AEVFPRAHHR LCLSLVMQNI LENLGQLRES EEFRTVLGRI VHNSVKVDEF EIAWEDMIQR 480 FGIKDHNWLQ TLYEDRERWA PVYSKETVFA GMFASQPGAL MNLFFDGYVH KETSLKEFFD 540 MYELVLQKKY EKESLDDFES KESIPMLKTG CPYESQLSKV YTKELFLKFQ EEVDMMASCL 600 SITQIHANGP IVTYMVKERE EDGNLRGIKN FEVMYEKAGL EVRCICSCFN FEGYLCRHAL 660 CVLTYNGVEE IPVQYILPRW RKDMERLYVL DLGSNSIDIT NPVQWYDHLC KKAVQVVEEG 720 MRSQDHYMAA WQAFKESLNK VRLVADKHM

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MSGGFSPTDE PLSPTPDLDI TIEEGSENSE QPLEEEGSEH EIDSEEVFRI ESDDPGRGPV  60
LGIESNDLQK DGDQVLEFGS NDQVLRIESN HNENNSDQML EIESNYHEDG GDCDTTIDQN  120
GVKGYHPPVV GLEFESYDDA YNYYNCYAKE LGFAIRVKSS WTKRNSREKR GAVLCCNCEG  180
FKTIKEASTR RKETRTGCLA MIRLRLVESN RWRVDEVKLE HNHLFDPERA QNSKSHKKMD  240
AGAKRKLEPS IDVEVRTIKL YRTPVVDTAG YGSSSEREVS NHVDESKRLK LKKGDAQVIH  300
NYFCRLQLTN PNFFYVMDIN DEGHLRHLFW IEPRSRAAYG YFGDVVALDT TCMSSKYEVP  360
LVSFVGVNHH GQSILLGCGL LADETLETYV WLLRTWLTCM LGRPPQTILT DQCKALQTAI  420
AEVFPRAHHR LCLSLVMQNI LENLGQLRES EEFRTVLGRI VHNSVKVDEF EIAWEDMIQR  480
FGIKDHNWLQ TLYEDRERWA PVYSKETVFA GMFASQPGAL MNLFFDGYVH KETSLKEFFD  540
MYELVLQKKY EKESLDDFES KESIPMLKTG CPYESQLSKV YTKELFLKFQ EEVDMMASCL  600
SITQIHANGP IVTYMVKERE EDGNLRGIKN FEVMYEKAGL EVRCICSCFN FEGYLCRHAL  660
CVLTYNGVEE IPVQYILPRW RKDMERLYVL DLGSNSIDIT NPVQWYDHLC KKAVQVVEEG  720
MRSQDHYMAA WQAFKESLNK VRLVADKHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein