PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057607.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 710aa MW: 82207.9 Da PI: 6.7569

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.7	7.1e-22	103	186	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH + XP_028057607.1 103 NYYNCYAKELGFAIRVKSSWTKRNSREKRGAVLCCNCEGFKTIKEAS-----TRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLF 186 69**************************************98877.....8999*****************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MLAQPVKFLA KKDSKTPLNG KKGKEKKKHL KDGDQVLEFG SNDQVLRIES NHNENNSDQM 60 LEIESNYHED GGDCDTTIDQ NGVKGYHPPV VGLEFESYDD AYNYYNCYAK ELGFAIRVKS 120 SWTKRNSREK RGAVLCCNCE GFKTIKEAST RRKETRTGCL AMIRLRLVES NRWRVDEVKL 180 EHNHLFDPER AQNSKSHKKM DAGAKRKLEP SIDVEVRTIK LYRTPVVDTA GYGSSSEREV 240 SNHVDESKRL KLKKGDAQVI HNYFCRLQLT NPNFFYVMDI NDEGHLRHLF WIEPRSRAAY 300 GYFGDVVALD TTCMSSKYEV PLVSFVGVNH HGQSILLGCG LLADETLETY VWLLRTWLTC 360 MLGRPPQTIL TDQCKALQTA IAEVFPRAHH RLCLSLVMQN ILENLGQLRE SEEFRTVLGR 420 IVHNSVKVDE FEIAWEDMIQ RFGIKDHNWL QTLYEDRERW APVYSKETVF AGMFASQPGA 480 LMNLFFDGYV HKETSLKEFF DMYELVLQKK YEKESLDDFE SKESIPMLKT GCPYESQLSK 540 VYTKELFLKF QEEVDMMASC LSITQIHANG PIVTYMVKER EEDGNLRGIK NFEVMYEKAG 600 LEVRCICSCF NFEGYLCRHA LCVLTYNGVE EIPVQYILPR WRKDMERLYV LDLGSNSIDI 660 TNPVQWYDHL CKKAVQVVEE GMRSQDHYMA AWQAFKESLN KVRLVADKHM

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MLAQPVKFLA KKDSKTPLNG KKGKEKKKHL KDGDQVLEFG SNDQVLRIES NHNENNSDQM  60
LEIESNYHED GGDCDTTIDQ NGVKGYHPPV VGLEFESYDD AYNYYNCYAK ELGFAIRVKS  120
SWTKRNSREK RGAVLCCNCE GFKTIKEAST RRKETRTGCL AMIRLRLVES NRWRVDEVKL  180
EHNHLFDPER AQNSKSHKKM DAGAKRKLEP SIDVEVRTIK LYRTPVVDTA GYGSSSEREV  240
SNHVDESKRL KLKKGDAQVI HNYFCRLQLT NPNFFYVMDI NDEGHLRHLF WIEPRSRAAY  300
GYFGDVVALD TTCMSSKYEV PLVSFVGVNH HGQSILLGCG LLADETLETY VWLLRTWLTC  360
MLGRPPQTIL TDQCKALQTA IAEVFPRAHH RLCLSLVMQN ILENLGQLRE SEEFRTVLGR  420
IVHNSVKVDE FEIAWEDMIQ RFGIKDHNWL QTLYEDRERW APVYSKETVF AGMFASQPGA  480
LMNLFFDGYV HKETSLKEFF DMYELVLQKK YEKESLDDFE SKESIPMLKT GCPYESQLSK  540
VYTKELFLKF QEEVDMMASC LSITQIHANG PIVTYMVKER EEDGNLRGIK NFEVMYEKAG  600
LEVRCICSCF NFEGYLCRHA LCVLTYNGVE EIPVQYILPR WRKDMERLYV LDLGSNSIDI  660
TNPVQWYDHL CKKAVQVVEE GMRSQDHYMA AWQAFKESLN KVRLVADKHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein