PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057608.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 701aa MW: 80993.1 Da PI: 5.8052

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.7	7e-22	94	177	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++r+etrtgC a++++++ ++++w+v++++leHnH + XP_028057608.1 94 NYYNCYAKELGFAIRVKSSWTKRNSREKRGAVLCCNCEGFKTIKEAS-----TRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLF 177 69**************************************98877.....8999*****************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MSGGFSPTDE PLSPTPDLDI TKDGDQVLEF GSNDQVLRIE SNHNENNSDQ MLEIESNYHE 60 DGGDCDTTID QNGVKGYHPP VVGLEFESYD DAYNYYNCYA KELGFAIRVK SSWTKRNSRE 120 KRGAVLCCNC EGFKTIKEAS TRRKETRTGC LAMIRLRLVE SNRWRVDEVK LEHNHLFDPE 180 RAQNSKSHKK MDAGAKRKLE PSIDVEVRTI KLYRTPVVDT AGYGSSSERE VSNHVDESKR 240 LKLKKGDAQV IHNYFCRLQL TNPNFFYVMD INDEGHLRHL FWIEPRSRAA YGYFGDVVAL 300 DTTCMSSKYE VPLVSFVGVN HHGQSILLGC GLLADETLET YVWLLRTWLT CMLGRPPQTI 360 LTDQCKALQT AIAEVFPRAH HRLCLSLVMQ NILENLGQLR ESEEFRTVLG RIVHNSVKVD 420 EFEIAWEDMI QRFGIKDHNW LQTLYEDRER WAPVYSKETV FAGMFASQPG ALMNLFFDGY 480 VHKETSLKEF FDMYELVLQK KYEKESLDDF ESKESIPMLK TGCPYESQLS KVYTKELFLK 540 FQEEVDMMAS CLSITQIHAN GPIVTYMVKE REEDGNLRGI KNFEVMYEKA GLEVRCICSC 600 FNFEGYLCRH ALCVLTYNGV EEIPVQYILP RWRKDMERLY VLDLGSNSID ITNPVQWYDH 660 LCKKAVQVVE EGMRSQDHYM AAWQAFKESL NKVRLVADKH M

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MSGGFSPTDE PLSPTPDLDI TKDGDQVLEF GSNDQVLRIE SNHNENNSDQ MLEIESNYHE  60
DGGDCDTTID QNGVKGYHPP VVGLEFESYD DAYNYYNCYA KELGFAIRVK SSWTKRNSRE  120
KRGAVLCCNC EGFKTIKEAS TRRKETRTGC LAMIRLRLVE SNRWRVDEVK LEHNHLFDPE  180
RAQNSKSHKK MDAGAKRKLE PSIDVEVRTI KLYRTPVVDT AGYGSSSERE VSNHVDESKR  240
LKLKKGDAQV IHNYFCRLQL TNPNFFYVMD INDEGHLRHL FWIEPRSRAA YGYFGDVVAL  300
DTTCMSSKYE VPLVSFVGVN HHGQSILLGC GLLADETLET YVWLLRTWLT CMLGRPPQTI  360
LTDQCKALQT AIAEVFPRAH HRLCLSLVMQ NILENLGQLR ESEEFRTVLG RIVHNSVKVD  420
EFEIAWEDMI QRFGIKDHNW LQTLYEDRER WAPVYSKETV FAGMFASQPG ALMNLFFDGY  480
VHKETSLKEF FDMYELVLQK KYEKESLDDF ESKESIPMLK TGCPYESQLS KVYTKELFLK  540
FQEEVDMMAS CLSITQIHAN GPIVTYMVKE REEDGNLRGI KNFEVMYEKA GLEVRCICSC  600
FNFEGYLCRH ALCVLTYNGV EEIPVQYILP RWRKDMERLY VLDLGSNSID ITNPVQWYDH  660
LCKKAVQVVE EGMRSQDHYM AAWQAFKESL NKVRLVADKH M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	0.0	FAR1 family protein