PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057610.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 532aa MW: 61745.7 Da PI: 7.2629

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.8	1.4e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHel+ XP_028057610.1 25 DFYNAYGGRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKEKHNHELV 114 6*****************************************999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MEPDNDCGWK PKVGMTFDSE ESAYDFYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN 60 KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH 120 MLSSQRKISD TQAIELDLAS ESGLRLGQSF ELMGREAGGR QSLDNEEQIG NMFWADAQMV 180 MDYAQFGDVV TFDTTYKLNK EHRPFASFVG CNHHRETVVF GAALLYDKTA ETFVWLFQTF 240 LEAMSKKAPK TLFTDEDAAM AKAIPIVMPD TSHRLCTWHL MQNALRHGNC LFQDKGVKGV 300 LNRFMFDIED ENEWEMKWGE MLDTYDAHDN HWLKLIFGVK EKWGWPYVRS TWAAGMSTTQ 360 LSESFNAFLK DYIRSDFNLN EFFMHFERVL CEKRYKELEA GYALCQRLPR VRAPFIMLSQ 420 MGNVYTKNIF EEFQDEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNARKV KMEMDGSLAC 480 SCSKFERKGI LCSHCLKVMR EILKLKEIPS QYIMKRWTKQ AKRRSCDGQV RE

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MEPDNDCGWK PKVGMTFDSE ESAYDFYNAY GGRMGFSIRR EYCKKNKLTK QIISRNLVCN  60
KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH  120
MLSSQRKISD TQAIELDLAS ESGLRLGQSF ELMGREAGGR QSLDNEEQIG NMFWADAQMV  180
MDYAQFGDVV TFDTTYKLNK EHRPFASFVG CNHHRETVVF GAALLYDKTA ETFVWLFQTF  240
LEAMSKKAPK TLFTDEDAAM AKAIPIVMPD TSHRLCTWHL MQNALRHGNC LFQDKGVKGV  300
LNRFMFDIED ENEWEMKWGE MLDTYDAHDN HWLKLIFGVK EKWGWPYVRS TWAAGMSTTQ  360
LSESFNAFLK DYIRSDFNLN EFFMHFERVL CEKRYKELEA GYALCQRLPR VRAPFIMLSQ  420
MGNVYTKNIF EEFQDEYFLS VESDIQAIEY IDGCSLYTVV DAIGKNARKV KMEMDGSLAC  480
SCSKFERKGI LCSHCLKVMR EILKLKEIPS QYIMKRWTKQ AKRRSCDGQV RE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein