PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057623.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 225aa MW: 25642.3 Da PI: 6.314

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	31	74	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT+ Ed+ + +a +++ + +W+ Ia+ ++ g+++++++ ++ XP_028057623.1 31 SWTKFEDKVFEQALVMFPEEkaeRWEMIAEQIP-GKSPEEVRAHY 74 7***************99*********.********9 PP
2	Myb_DNA-binding	45.7	1.5e-14	131	175	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k +G+g+W++I+r + +Rt+ q+ s+ qky XP_028057623.1 131 PWTEEEHRLFLLGLKTYGKGDWRSISRNVVVTRTPTQVASHAQKY 175 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MMFGDHHNYS SSDTNRWSMI GNSSATQSSS SWTKFEDKVF EQALVMFPEE KAERWEMIAE 60 QIPGKSPEEV RAHYEALVHD VFEIDSGRVE LPSYSDDWWD EPESTPSQIS FGSSAAAKTK 120 HGEADRKKGT PWTEEEHRLF LLGLKTYGKG DWRSISRNVV VTRTPTQVAS HAQKYYLRQN 180 SAKKERKRSS IHDITTTVDT NSIPPPPQFP NQGASTGYQS FNYPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	4e-78	MYB family protein