PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057624.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 248aa    MW: 26912.4 Da    PI: 10.3352
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.86.4e-18168202135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C + kTp+WR gp g ktLCnaCG++y++ +l
  XP_028057624.1 168 CSHCLVQKTPQWRAGPLGAKTLCNACGVRYKSGRL 202
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MATASVLKTS TFSVTDDFRS ELSVPADDLA NLEWLSHFVE DSFSEYSLAG KLPDKTTGNR  60
SEPLEIAVLA KSCFTTPVQT KARSKRLRTG SRVWSLGSPS LTETTSSSSS SSSTLSSSPP  120
NPWLIFTTLS QTADSLLRPP LPAAKKPKRK RQEIPGGGGG GSQQPRRCSH CLVQKTPQWR  180
AGPLGAKTLC NACGVRYKSG RLLPEYRPAC SPTFSSEVHS NNHRKVLEMR RKKEVEDGGG  240
FAPPVQSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51080.19e-59GATA family protein