PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057652.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 562aa MW: 61066.9 Da PI: 6.4492

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.1	3.8e-09	382	429	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_028057652.1 382 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 429 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MDKEYFLSAC VHFEPSPVQN WQSLFSSQEM NCSPEQSLDC FLNPKWDKST DQYANFESAL 60 SSMVSSPAAS NSAVSNDSFE IPELIGKLAN ICNSGEISPQ SHPLLAATAA YIGGGNSSPL 120 NSQSHLPIMG HFVKEKLPNL GKSMPLNPNL RALSDDPGFA ERAAKFSCFG SRSFNGRTNQ 180 LGLNNTELPY RSSPLMGSLN LHGVSSSPSL KQAVSPMAAN QENKNSTQTQ MEMVTKNGSD 240 TKFNKVPGSA ASDRTEFASS NEGSSVSEQI PIGETGLKTP SDSNSRKRKA ASRGKSKEIA 300 PIPSSNTTKV AETEDNSNSK RCKSSDANGS ENGSVKTEEE MQGTANAAGE EDHKQTKANQ 360 KLPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL LQDLVPGCNK VTGKALMLDE 420 IINYVQSLQR QVEFLSMKLA SVNPRLDFNM DSLVPKDVLQ PHPVYPLDSS ASPFFGHQNQ 480 QAPQTHTNAS NVTVTKCSVD PSVQLSLFDE LCQGLPQFPT LCEDDLQSFV QMGFGQNANC 540 NTGFHSQSFP GSSQTSHMKL EL

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MDKEYFLSAC VHFEPSPVQN WQSLFSSQEM NCSPEQSLDC FLNPKWDKST DQYANFESAL  60
SSMVSSPAAS NSAVSNDSFE IPELIGKLAN ICNSGEISPQ SHPLLAATAA YIGGGNSSPL  120
NSQSHLPIMG HFVKEKLPNL GKSMPLNPNL RALSDDPGFA ERAAKFSCFG SRSFNGRTNQ  180
LGLNNTELPY RSSPLMGSLN LHGVSSSPSL KQAVSPMAAN QENKNSTQTQ MEMVTKNGSD  240
TKFNKVPGSA ASDRTEFASS NEGSSVSEQI PIGETGLKTP SDSNSRKRKA ASRGKSKEIA  300
PIPSSNTTKV AETEDNSNSK RCKSSDANGS ENGSVKTEEE MQGTANAAGE EDHKQTKANQ  360
KLPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL LQDLVPGCNK VTGKALMLDE  420
IINYVQSLQR QVEFLSMKLA SVNPRLDFNM DSLVPKDVLQ PHPVYPLDSS ASPFFGHQNQ  480
QAPQTHTNAS NVTVTKCSVD PSVQLSLFDE LCQGLPQFPT LCEDDLQSFV QMGFGQNANC  540
NTGFHSQSFP GSSQTSHMKL EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-66	bHLH family protein