PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028057687.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 186aa    MW: 20899.9 Da    PI: 7.893
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028057687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.53.1e-40111101100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+l+r+C+++C +apyf +++pkkfa vhk+FGasnv+k+l ++pee+red+++slv+eAear+rdPvyG++g i  lq+++ +l+++la
  XP_028057687.1  11 SCAACKFLKRRCSPNCLFAPYFRSDEPKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLVFEAEARLRDPVYGCIGAIALLQKKMVELQHDLA 105
                     6*********************************************************************************************9 PP

          DUF260  96 llkee 100
                      ++++
  XP_028057687.1 106 IARTR 110
                     98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MKGQEPRSSS SCAACKFLKR RCSPNCLFAP YFRSDEPKKF AKVHKVFGAS NVSKILIEVP  60
EEQREDTVNS LVFEAEARLR DPVYGCIGAI ALLQKKMVEL QHDLAIARTR LARYVVAKPS  120
HPHQHQHQHH PLLLLDNNNH DHIVVSPLVD LPGVCSDGWV ESFNQNSLES YQGGSMGELS  180
QFPFPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.13e-64LBD family protein