PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057848.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRAS

Protein Properties

Length: 237aa MW: 27292.9 Da PI: 4.2113

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	78.4	1.3e-24	100	227	3	142
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +l+ + ea+++g+ el + +++r+se +sp g m +l y+ + ++ +++s ++ aa+ +f++++P+ kf+h++ XP_028057848.1 100 HLIKAYREAIDEGQIELSEVIMKRISEKVSPVGGVMDQLLYYLFQPVDKQADY----------LRQES---DKNFRAAFMTFYQIFPYGKFAHFA 181 666677799*******************************99988887776..........33333...4556678889********** PP GRAS 98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppsl 142 aN+aIl+a+ ++ e +H+iDfd+++G+QWp++++a+ ++++ +l XP_028057848.1 182 ANRAILQAMPHDvELIHVIDFDMGEGIQWPSMIEAIGWQQRKEIRL 227 *****9998999*****************98766655555 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MDVDMDDDNF DFCPPFITTE DYSFDNSKIS TFPIPTTLLD KFSDPQVHVK DSDIALPEDG 60 FSISVEDFDI EVLSNSLKQS EESLQLTLPT ENMELNNAIH LIKAYREAID EGQIELSEVI 120 MKRISEKVSP VGGVMDQLLY YLFQPVDKQA DYLRQESDKN FRAAFMTFYQ IFPYGKFAHF 180 AANRAILQAM PHDVELIHVI DFDMGEGIQW PSMIEAIGWQ QRKEIRLRPH IEALSLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01570.1	1e-17	GRAS family protein