PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028057886.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 303aa MW: 33567.3 Da PI: 8.0658

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028057886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.3e-14	99	150	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r+ h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+eY+k+L+ XP_028057886.1 99 QRMIHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEYVKELE 150 6999************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MALQALSTNE LLNFIVYDTI SATPYICNDS PETTFLPETC LKSQELGGAS DSSSSMKHRR 60 CRLAGPEAAD KRQSAAVQGR KKRRRRPKVC KNKEDAETQR MIHIAVERNR RKQMNEHLAV 120 LRSLMPESYV QRGDQASIVG GAIEYVKELE HLLQSLEAQK LQLLQQGGTA TSNTATAAAT 180 AEFLTVPFGQ FFAYPQYTWS QFQNKCASKS EGSVADIEVN LIETHANLKI LSRKSISQLS 240 KMVAAFQTMY LTILHLNVTT LDPLVLYSIS AKVEEGCQLT SADDIAGAVH HMLRIIEEGS 300 TLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	86	RKKRRRR
2	81	86	KKRRRR
3	100	111	RMIHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	9e-70	bHLH family protein