PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058083.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 335aa    MW: 37677.9 Da    PI: 7.9028
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.84.6e-32115170359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     ++rY+eClkNhAa++G+h+vDGCgEfmps geegt++ lkCaAC+CHRnFHR+e e 
  XP_028058083.1 115 SFRYRECLKNHAANMGCHVVDGCGEFMPS-GEEGTPEELKCAACDCHRNFHRKEIEG 170
                     689*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MELRGQDKDM GISIGYSTTT TAAVTGRRRN DHHQSTVLNP TQQTLDHHLH QQLNLHQQTH  60
VEGRDPNPDP DPDPTPSPSP SPSPTIARAS NSKTPPPPQP PPPPSLEANS GSSASFRYRE  120
CLKNHAANMG CHVVDGCGEF MPSGEEGTPE ELKCAACDCH RNFHRKEIEG EFQQPGTNSY  180
YPYNPNRNTT HRTTTTTHLP QPLPPPPPPH HHHHHHRYAP PTGPFQPVMM AFGGGVAAES  240
SSEDLNNMVF HCNDGTQPPM GIVQQPFTGS KKRFRTKFSQ EQKDRMQQFA ERLEWKIQKQ  300
DEEQVQQFCG EVGVKRQVFK VWMHNNKQAM KKKQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.17e-59ZF-HD family protein