PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058086.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 80aa    MW: 8989.99 Da    PI: 9.2133
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.69.2e-111458345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+   +l+ +a +++ ++   +W  +ar +g g++++++k ++ 
   XP_028058086.1 14 SWTPKQNKLFEKALAKYDKDtpdRWQNVARAVG-GKSAEEVKRHYE 58
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MASNCSSSCS SGSSWTPKQN KLFEKALAKY DKDTPDRWQN VARAVGGKSA EEVKRHYELL  60
VQDLRHIESG SVPFPNYRSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-35MYB_related family protein