PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058255.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HD-ZIP
Protein Properties Length: 205aa    MW: 23738.2 Da    PI: 9.152
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.41e-173083356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  XP_028058255.1 30 KKRRLNLEQVKTLEKNFELGNKLESERKMQLARALGLQPRQIAIWFQNRRARWK 83
                    4557899**********************************************9 PP
2HD-ZIP_I/II1261.7e-4029118190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     ekkrrl+ eqvk+LE++Fe  +kLe+erK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lkr++da+k++n++L++++++L++e
  XP_028058255.1  29 EKKRRLNLEQVKTLEKNFELGNKLESERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFDAIKDDNDALQSQNQKLQAE 118
                     69*************************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MSFSAIEVCD HETNGVEDDL SDDGSQAGEK KRRLNLEQVK TLEKNFELGN KLESERKMQL  60
ARALGLQPRQ IAIWFQNRRA RWKTKQLEKD YDVLKRQFDA IKDDNDALQS QNQKLQAERA  120
EWIKYLGVFA NMETRANQVY DATICSIFIL YMESIQRGVV LPILKRCGFV ESIQRGPLKF  180
YNKEIHAAAF CLPSFAKKVI ESKSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17886RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-60HD-ZIP family protein