PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058285.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 403aa MW: 46829.6 Da PI: 6.5749

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	49	134	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk++GF ++ ++++ + r+ge++ C++ + +++++ + +++ +++++Cka+++ +++kdg++++t+++leH+H++ XP_028058285.1 49 FYAKYAKQLGFAISYRTQNVT-RDGEVKYFGIECTRARNITKKSEV--NPLEPSLSSKIDCKARVRATLQKDGRYKLTTIVLEHTHDFI 134 9***********9998887.8999******9998887765..9999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDIDSMNNSF NVSEEVEEQD NNVEFNESGE VEESKKGICF ISKQEVHTFY AKYAKQLGFA 60 ISYRTQNVTR DGEVKYFGIE CTRARNITKK SEVNPLEPSL SSKIDCKARV RATLQKDGRY 120 KLTTIVLEHT HDFIPSDSRH FPMNKRTLTP VKRRLEVNDA AGIGVARNFH SIVVEAGGHE 180 ALTFDEQDAR NYIQNARRLK LGVGDTESVT FYFHKMQQQN SNFYSAIDLD EDGVNHHGQS 240 ILFGCGLLSN ENTKTFVWLF KEWLSCMSDA PPKAIITDQC RAMQNAIEIV FPQARHRWCL 300 WHIMKKIPEK LRGYSQYESI KVALSNAVYD SFTKDEFQEY WEAMIENFNL NDNEWLRVLY 360 HERHRWIPAY VKDIFWAGMS TTQRSESMNA FFDGYVNSSW MRS

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDIDSMNNSF NVSEEVEEQD NNVEFNESGE VEESKKGICF ISKQEVHTFY AKYAKQLGFA  60
ISYRTQNVTR DGEVKYFGIE CTRARNITKK SEVNPLEPSL SSKIDCKARV RATLQKDGRY  120
KLTTIVLEHT HDFIPSDSRH FPMNKRTLTP VKRRLEVNDA AGIGVARNFH SIVVEAGGHE  180
ALTFDEQDAR NYIQNARRLK LGVGDTESVT FYFHKMQQQN SNFYSAIDLD EDGVNHHGQS  240
ILFGCGLLSN ENTKTFVWLF KEWLSCMSDA PPKAIITDQC RAMQNAIEIV FPQARHRWCL  300
WHIMKKIPEK LRGYSQYESI KVALSNAVYD SFTKDEFQEY WEAMIENFNL NDNEWLRVLY  360
HERHRWIPAY VKDIFWAGMS TTQRSESMNA FFDGYVNSSW MRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-72	FAR1 family protein