PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058369.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 543aa MW: 62573.4 Da PI: 8.225

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.7	4.5e-19	37	122	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk+vGFs+ +++ ++ge Cs++gkr+++++ + +++ +t++gCka+++ +++kdg++++t+++leHnH+l XP_028058369.1 37 FYAKYAKHVGFSIAHKTQVFG-DDGELRYFGIECSRSGKRTKKSEV--NPLKPSLSTKIGCKARVRASLQKDGRFMLTTVNLEHNHDLI 122 9***********9988776.9999***********98866..999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MEIDSKSGEN PLLNESEEVE EPKRGMCFSS KQEVYTFYAK YAKHVGFSIA HKTQVFGDDG 60 ELRYFGIECS RSGKRTKKSE VNPLKPSLST KIGCKARVRA SLQKDGRFML TTVNLEHNHD 120 LIPTDSRYFA MNKKILTPVK RKLEVNDQVG NYHSMVVEAG GYESLTFDER DARNYIDRTR 180 RLRLKEGDSD ALQKYFMRMQ AQNSSFYSMI DVDTDFCIRN LFWADAISRT AYKEFGDVVS 240 FDTTYLTNKY DMPFVSFVGV NHHGQSILLG CGLLCSEDTD TFIWLFKSLL NCMSDHPPKA 300 IITDQCKAMQ NAIEIVFPNT RHRWCLWHIM KKIPEKLKGY SQYESIKLAL QNAVYDTITK 360 DEFETKWKEM IAEFNLYENE WLGVLYNERH RWVPVYVKDI FWAGISTTQR SESMNAFFDG 420 YVNPKTTLKG IMCAHSLVVL IARCINEVPN KYILPRWRKD LDRGYTCIKT TYTGFGDDFN 480 AKVYDKMNRK FIGIVQVAGN SEGKIKIIDR GLDEIKERVM KEESGDGSNL PCSTKSPIHT 540 GST

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MEIDSKSGEN PLLNESEEVE EPKRGMCFSS KQEVYTFYAK YAKHVGFSIA HKTQVFGDDG  60
ELRYFGIECS RSGKRTKKSE VNPLKPSLST KIGCKARVRA SLQKDGRFML TTVNLEHNHD  120
LIPTDSRYFA MNKKILTPVK RKLEVNDQVG NYHSMVVEAG GYESLTFDER DARNYIDRTR  180
RLRLKEGDSD ALQKYFMRMQ AQNSSFYSMI DVDTDFCIRN LFWADAISRT AYKEFGDVVS  240
FDTTYLTNKY DMPFVSFVGV NHHGQSILLG CGLLCSEDTD TFIWLFKSLL NCMSDHPPKA  300
IITDQCKAMQ NAIEIVFPNT RHRWCLWHIM KKIPEKLKGY SQYESIKLAL QNAVYDTITK  360
DEFETKWKEM IAEFNLYENE WLGVLYNERH RWVPVYVKDI FWAGISTTQR SESMNAFFDG  420
YVNPKTTLKG IMCAHSLVVL IARCINEVPN KYILPRWRKD LDRGYTCIKT TYTGFGDDFN  480
AKVYDKMNRK FIGIVQVAGN SEGKIKIIDR GLDEIKERVM KEESGDGSNL PCSTKSPIHT  540
GST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	9e-96	FAR1 family protein