PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058471.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 232aa    MW: 25116.7 Da    PI: 10.2714
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind231.18.6e-7152232125301
       GAGA_bind 125 elreeeklealpieeaaeeakekkkk.kkrqrakkpkekkak.....kkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvC 213
                     ++    + ++ p++e ae++++ +k+ kk+++ak+p +  ++     ++kkk++ skk++k+   ++ +k e+k++++v n+ +lD s++P P C
  XP_028058471.1  52 GIAAVPICSVAPMSEPAENTTNPTKVkKKKSTAKSPNQFASDvlrpkQPKKKPSGSKKSKKQF--EPGTKVERKNLNVVFNEADLDFSGVPSPYC 144
                     344445556666666665555544440444455555554444441215555444443333333..378*************************** PP

       GAGA_bind 214 sCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     sCtG+ r CYk G+GGWqS+CCtt+iS yPLP+s  ++gaR+agrKmS+ga+ klL +LaaeG dls+p+DLkdhWA+ Gtnkfvti+
  XP_028058471.1 145 SCTGVARGCYKNGAGGWQSSCCTTNISEYPLPMSCMKPGARVAGRKMSSGAYGKLLCRLAAEGRDLSHPLDLKDHWARLGTNKFVTIK 232
                     ***************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGTHHDRNPF ISEPNTEASI PHFSWAHSGN FFSATKIGSN PFQASQMDPK PGIAAVPICS  60
VAPMSEPAEN TTNPTKVKKK KSTAKSPNQF ASDVLRPKQP KKKPSGSKKS KKQFEPGTKV  120
ERKNLNVVFN EADLDFSGVP SPYCSCTGVA RGCYKNGAGG WQSSCCTTNI SEYPLPMSCM  180
KPGARVAGRK MSSGAYGKLL CRLAAEGRDL SHPLDLKDHW ARLGTNKFVT IK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
178112KKKKSTAKSPNQFASDVLRPKQPKKKPSGSKKSKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.32e-57BBR-BPC family protein