PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058556.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 93aa    MW: 10598.4 Da    PI: 9.4279
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.8e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
   XP_028058556.1 14 KGPWTAEEDKKLINFILSNGQCCWRAVPKLSGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL SNGQCCWRAV PKLSGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SDYEEKMVID LHAQLGNSGE MKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.11e-60MYB family protein