PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058616.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 140aa    MW: 15876.7 Da    PI: 5.0952
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB174.61e-5416111297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eq+r+lPianv+rimk++lPanakisk+aket+qecvsefisfvtseas+kc++e+rkt+ngdd++wal+tlGf+dy+ plk yl++yreleg+
  XP_028058616.1  16 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFVTSEASEKCKKERRKTVNGDDVCWALGTLGFDDYAGPLKRYLHRYRELEGD 110
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     +
  XP_028058616.1 111 R 111
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MGDNIGPGGS EDGYIKEQER LLPIANVGRI MKQILPANAK ISKEAKETMQ ECVSEFISFV  60
TSEASEKCKK ERRKTVNGDD VCWALGTLGF DDYAGPLKRY LHRYRELEGD RANQDKVSNE  120
EREEPSSYRD NNNQPSSRPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.15e-60NF-YB family protein