PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058630.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 256aa    MW: 27850.2 Da    PI: 6.8352
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA453.6e-141341583458
       CBFB_NFYA  34 srkpylheSRhkhAlrRpRgsgGrF 58 
                     + +pylheSRh+hA+rR+Rg+gGrF
  XP_028058630.1 134 GAQPYLHESRHQHAMRRARGCGGRF 158
                     679*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MPTNSENEDR QSENGAHVIP PSTVYSQPWW RVTGTNGMPS PVEHINGSAT GRAMSQANGD  60
ASNKEAHTIN AQQSGLNGHN VQEQQHLKHV PSSTPPAMGE HLEPNSQMEL VGHSIVLTSY  120
PYPDPHYGGI MAYGAQPYLH ESRHQHAMRR ARGCGGRFLN SKKLDSNATN PSANLSGSDH  180
LPLNSNRNSG HREKELPMYQ DMHGAHKSSN GNNINGHGLS MHHYSQSTDS DGGDWFDQEE  240
GSVLVSQAPR GPTTTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.34e-14NF-YA family protein