PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058638.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 143aa    MW: 16279 Da    PI: 9.4731
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA514.7e-166094136
       CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36
                    +ep+YVNaKQy++Il+RRq Rakle ekk+ +k+rk
  XP_028058638.1 60 EEPVYVNAKQYHGILRRRQIRAKLELEKKV-IKARK 94
                    69****************************.88887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MGEHLEPNSQ MELVGHSIVL TSYPYPDPHY GGIMAYGAQV HPYLLGIHQT RMPLPLEMKE  60
EPVYVNAKQY HGILRRRQIR AKLELEKKVI KARKVGVTVC GFYSLNEIKV PSIINYEILL  120
AIRTSKPSFP DPTNKPPNKV ETD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-27NF-YA family protein