PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058671.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 271aa MW: 30067.7 Da PI: 8.2002

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.4	1.3e-13	93	139	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR++iNs +++Lr+llP + K +Ka+ L k+++ +k+L XP_028058671.1 93 KNHKEAEKRRRQKINSHLDKLRTLLPCN-----SKTDKASLLAKVIQRVKEL 139 78***********************8.....7**********999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MQPENWPESA DLYRYLAGNG VVDVGGINGM YGIPANCYDF PTTTRMTTQH CQSGYNGGGA 60 SFYGPSWEVV SGITETSTTT TTTAEERALV ASKNHKEAEK RRRQKINSHL DKLRTLLPCN 120 SKTDKASLLA KVIQRVKELK QQTSELNLET FPSETDEISV QYSNSNKSIN DGGRLLIKAS 180 LCCEDRSDLI PDLIETLRSL RLNPLRAEMA TLGGRTRNVL VVAGNEDQSS DELVQFLRDA 240 LKSFVHRSSS SSDLKDRSKR RRVFDSSPTI A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	263	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56770.1	3e-59	bHLH family protein