PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058693.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 391aa    MW: 43719.5 Da    PI: 7.9508
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH246.9e-08147167526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f++ G Ck Gd C FaHg
  XP_028058693.1 147 ACPEFRK-GNCKKGDACEFAHG 167
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MPTRVSLYVH STKKMMIGER NHPNPMVHVP PWTVSDDPTV DISFPFSVTG ISVNHNGNAD  60
DCYPFDALTA LHRYLPSNDV DLESEESGRE SDLPVDPYSC DQFRMFEFKV RKCMRGRSHD  120
WTECPYAHPG EKARRRDPRK FNYSGTACPE FRKGNCKKGD ACEFAHGVFE CWLHPGRYRT  180
QPCKDGPNCR RRVCFFAHMP DQLRVLSPRT PGSVESYDGS PLRLAMEGSC AKGLTFMSSP  240
ESISPPSESP PMSPMTTNSL SRSLGSNSIN EMVASLRQLQ LNKVKSMPSS WGIQMGGSPG  300
FVSPRLSLTR PAFCSLPSTP TRARTRTGIG SFDLWDKGVC EEEPVMERVE SGRDLRAKMF  360
EKLSRENPLD RADPAQPTSG PDVGWVSELV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-129C3H family protein