PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058694.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 251aa MW: 27866.3 Da PI: 7.7611

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058694.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.9	1.1e-13	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEd l+++++++G+ +W + +++ g+ R++k+c++rw++yl XP_028058694.1 14 RGTWSPEEDITLKNYIEKFGTVsNWISLPQKAGLMRCGKSCRLRWLNYL 62 89****************88***********************97 PP
2	Myb_DNA-binding	48.6	1.8e-15	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd +++ + + +G++ W+ Ia++++ gRt++++k++w++ XP_028058694.1 69 GGFTEEEDNIILSLYHNMGSR-WSVIASHLP-GRTDNDVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGRAPCCDKT KVKRGTWSPE EDITLKNYIE KFGTVSNWIS LPQKAGLMRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDNIIL SLYHNMGSRW SVIASHLPGR TDNDVKNYWN TKLKKKLLLK 120 NTTFKSTTNT KLNTYCHRNS DCSNTSTSGV LQHAMINANY QQNLVPEVVL SDPIQVPESG 180 SPSTYICSSG GVSTSSQEVT SLSPFENKDG LWPGNGGGGA AQDDDGFLMG LVGSGFYYDL 240 LNDFDFEEKI G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-64	MYB family protein