PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028058740.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 97aa    MW: 11105.6 Da    PI: 7.5065
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028058740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.39.4e-10653246
                     SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqk 46
                      +W++   +l+ +a + +G      +W+ Iar +g g++ +++k ++ +
   XP_028058740.1  6 SNWSAKQNKLFENALAIYGHMeapeRWENIARAVG-GKSVEEVKRHYEM 53
                     58*****************77**************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MGSNSSNWSA KQNKLFENAL AIYGHMEAPE RWENIARAVG GKSVEEVKRH YEMLVEDVNQ  60
IESGQVPLPY YKPVAGSNKG YKFMDDQEQR LKCLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-31MYB_related family protein