PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028058825.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 215aa MW: 25110.1 Da PI: 6.1709

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028058825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	10	55	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEd +l d+++ +G g+W++ a++ g++R++k+c++rw++yl XP_028058825.1 10 LWTVEEDRILMDYIRVHGEGRWNRLAEMTGLKRCGKSCRLRWNNYL 55 6********************************************7 PP
2	Myb_DNA-binding	58.7	1.3e-18	62	106	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +++eEd+l+++++++lG++ W++Ia +++ gRt++q+k++w+++l XP_028058825.1 62 GDFSEEEDDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 106 789****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MEREKGYKKL WTVEEDRILM DYIRVHGEGR WNRLAEMTGL KRCGKSCRLR WNNYLSPRIK 60 HGDFSEEEDD LIIRLHNLLG NRWSLIAGRV PGRTDNQVKN HWNTHLSKKL GVKKEITKLG 120 ASSQTISTKL IESDSVPMHA SSNPPSDSNI RAEEQKVDDN GYQSNVGFLE VEDQQRINES 180 YESPFWFPDD DLRLSTPSLM EILDEYSFDF VWHNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-67	MYB family protein