PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059000.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 135aa    MW: 15177.9 Da    PI: 10.6849
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA602.9e-192054135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    Cs C+ttkTplWR gp g+k+LCnaCG++y k+++
  XP_028059000.1 20 CSDCHTTKTPLWRVGPAGPKSLCNACGIKYNKRRR 54
                    *******************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MDLKEKEAKG PGEMMIKKSC SDCHTTKTPL WRVGPAGPKS LCNACGIKYN KRRRALLGLD  60
RGRIEKGKKK RKKNRGGGNC RVGESLKLRL MALETDMVLQ RSEKQRNKLG EEERAAILLM  120
ALSCGSLYAF REEKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15173KRRRALLGLDRGRIEKGKKKRKK
25274KRRRALLGLDRGRIEKGKKKRKK
36973KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.18e-27GATA family protein