PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059060.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 563aa MW: 65153.6 Da PI: 7.4612

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.7	3.4e-27	30	118	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYne+++ +GFs+r++++++ k++g+i++r+fvCskeg+r+e+k++ +k++++r+etrtgCka++ v+ +k +++++v++++++HnH+l XP_028059060.1 30 DFYNEFGRITGFSLRIEYTNTCKKTGRIISRRFVCSKEGFRREDKRD-DKTKNSRQETRTGCKARMSVSFNKnRQNYVVIDFVEDHNHPL 118 6*****************************************999.9*****************9999************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MCEAVSSSLT ILDYKPQMGL EFDSLDAAKD FYNEFGRITG FSLRIEYTNT CKKTGRIISR 60 RFVCSKEGFR REDKRDDKTK NSRQETRTGC KARMSVSFNK NRQNYVVIDF VEDHNHPLHI 120 PQCVHLLPSQ RKIAKAQAIE ADLAEASGIR WRSTFELASR QAGGRECLGF TRQDLKNYLR 180 TKCQKELKFG EAGSLLAYFA DKSMKDSSFH FTMQLDVGEQ ITNIFWADPK MIIDYSLFGD 240 FMSFDTTYRT HKDYWPLAVF VGFNNYRKTV IFGAALLYDE TIASFEWLFK SFLDAMPGKQ 300 PKTIFTDQDP AMAKAISTVL PDTFHRICTW HMRQNAIKHL GSKYRGDDGG IGAELTKFIY 360 NYKDEESFSS VWEDILDKFD VCDSSWLPTI YRVREKWGKP YVMEVWSAWA DTTQVSESFN 420 GKLRTFLQLD LGILYFFKHF ERIIDDITHI EFDCEYASRQ KLPKIGLPVP LLINAGDFYT 480 NPIFEIFKEQ FLKSLSAFAW KRDENNLSHD YMVKVLDEPK VREVKVNLQG PMVSCTCQLF 540 ESCGILCAHA LKGLDMMNIK DIP

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MCEAVSSSLT ILDYKPQMGL EFDSLDAAKD FYNEFGRITG FSLRIEYTNT CKKTGRIISR  60
RFVCSKEGFR REDKRDDKTK NSRQETRTGC KARMSVSFNK NRQNYVVIDF VEDHNHPLHI  120
PQCVHLLPSQ RKIAKAQAIE ADLAEASGIR WRSTFELASR QAGGRECLGF TRQDLKNYLR  180
TKCQKELKFG EAGSLLAYFA DKSMKDSSFH FTMQLDVGEQ ITNIFWADPK MIIDYSLFGD  240
FMSFDTTYRT HKDYWPLAVF VGFNNYRKTV IFGAALLYDE TIASFEWLFK SFLDAMPGKQ  300
PKTIFTDQDP AMAKAISTVL PDTFHRICTW HMRQNAIKHL GSKYRGDDGG IGAELTKFIY  360
NYKDEESFSS VWEDILDKFD VCDSSWLPTI YRVREKWGKP YVMEVWSAWA DTTQVSESFN  420
GKLRTFLQLD LGILYFFKHF ERIIDDITHI EFDCEYASRQ KLPKIGLPVP LLINAGDFYT  480
NPIFEIFKEQ FLKSLSAFAW KRDENNLSHD YMVKVLDEPK VREVKVNLQG PMVSCTCQLF  540
ESCGILCAHA LKGLDMMNIK DIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein