PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059063.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 539aa MW: 63361.9 Da PI: 8.0124

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.8	1.5e-17	25	105	1	79
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevt 79 +fYn+Y+ ++GFs+r+++ kk k +++ ++r +vC+keg+r+ +k++ ++++raetr gC+a+l ++ ++ +++ ++t XP_028059063.1 25 EFYNTYGGRMGFSIRRDYCKKDKFTNQLIHRLLVCNKEGFRKVDKRD-PLSKNSRAETRSGCEARLYINYMRvleNNEEQIT 105 6*****************************************999.9999**************99876656666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MEPENDCDWK PKLGMIFDSE QCAYEFYNTY GGRMGFSIRR DYCKKDKFTN QLIHRLLVCN 60 KEGFRKVDKR DPLSKNSRAE TRSGCEARLY INYMRVLENN EEQITNMFWA DAQMIMDYAQ 120 FGDVVTFDTT YKLNKEHRPF ESFVGFNHHR ETVIFGAALL YDETAESFVW LFEKFLEAMS 180 RKAPKTLFTD QDAAMAKAIP IVMPDTSHRL CTWHLMQNAL KHVNCLFQDK GVKGVLNKFF 240 FHIEDTNQWK LEWAEMLDKY DAHENHWLKL TFAVKEKWGW PYVRSTWAAG MSTTQLSESF 300 NAFLKDYIRS DFNLNEFFMH FERVLYEKRY KELEAGYALC QRLTKVKATI RMLIQMGNVY 360 TKKIFEEFQN EYFKSIESNI EAIEYGEAST IYTVVDVGNK HARKVKLERD GSLGCNCTKF 420 EREGILCSHS LKVIRDILKM KEVPSQYILK RWTKQARAET VQHIKENDIQ VDVKFQQASR 480 YKTLMTAFRA VASRAAETEE TYDFCIAYLA TLGADVEGKV LILVLEMKYV MMMIPKALK

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MEPENDCDWK PKLGMIFDSE QCAYEFYNTY GGRMGFSIRR DYCKKDKFTN QLIHRLLVCN  60
KEGFRKVDKR DPLSKNSRAE TRSGCEARLY INYMRVLENN EEQITNMFWA DAQMIMDYAQ  120
FGDVVTFDTT YKLNKEHRPF ESFVGFNHHR ETVIFGAALL YDETAESFVW LFEKFLEAMS  180
RKAPKTLFTD QDAAMAKAIP IVMPDTSHRL CTWHLMQNAL KHVNCLFQDK GVKGVLNKFF  240
FHIEDTNQWK LEWAEMLDKY DAHENHWLKL TFAVKEKWGW PYVRSTWAAG MSTTQLSESF  300
NAFLKDYIRS DFNLNEFFMH FERVLYEKRY KELEAGYALC QRLTKVKATI RMLIQMGNVY  360
TKKIFEEFQN EYFKSIESNI EAIEYGEAST IYTVVDVGNK HARKVKLERD GSLGCNCTKF  420
EREGILCSHS LKVIRDILKM KEVPSQYILK RWTKQARAET VQHIKENDIQ VDVKFQQASR  480
YKTLMTAFRA VASRAAETEE TYDFCIAYLA TLGADVEGKV LILVLEMKYV MMMIPKALK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-73	FAR1 family protein