PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059362.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 205aa    MW: 22600.5 Da    PI: 4.8868
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.5e-11102149454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL +A++ + +L
  XP_028059362.1 102 SKACREKLRRDRLNDKFVELGSILEPG---RPPKTDKAAILVEAIRLVIQL 149
                     6789**********************8...89*************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MEESGILATA SMRWKIIELS GDLSDMVSPE HTNWLFDYGL IEDISVPDPN FSAPTSGFCW  60
PLNASSNVGL EIDGSFGDSD SRKETGSKKR PRPELCGASS SSKACREKLR RDRLNDKFVE  120
LGSILEPGRP PKTDKAAILV EAIRLVIQLR GDAQKLKDSN LTLQEKIKEL KAEKNELREP  180
IAVQCSRSSV DCLAQEGTYE SPSTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18993KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-57bHLH family protein