PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059366.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 210aa    MW: 24992.8 Da    PI: 10.2084
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.42.3e-5271351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yLk+k+++ k++l +vi ++d+y++ePwd++      ++e+++wyfFs++dkky+tg+r+nrat++g+Wkat +dk+v
  XP_028059366.1   7 VPPGFRFHPTEEELVGYYLKQKINSLKIDL-DVIVDIDLYRIEPWDIQDrcrLGYEEQSKWYFFSHKDKKYPTGTRTNRATAAGFWKATRRDKAV 100
                     69****************************.99**************943432233566************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ls k++ +g++ktLvfykgrap+g+k+dW+mheyrl
  XP_028059366.1 101 LS-KNRIIGMRKTLVFYKGRAPNGRKSDWIMHEYRL 135
                     **.8999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLKQKIN SLKIDLDVIV DIDLYRIEPW DIQDRCRLGY  60
EEQSKWYFFS HKDKKYPTGT RTNRATAAGF WKATRRDKAV LSKNRIIGMR KTLVFYKGRA  120
PNGRKSDWIM HEYRLQTFEH APPQASSINS LQHNKCFQVF LIKITSKLNG KQCQEHKWKT  180
NFYNFLVRTT KYYPITASRL QKYTPLIPHT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-70NAC family protein