PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059573.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 811aa MW: 93108.8 Da PI: 8.4447

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.2	1.6e-24	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ + ++++r+e rtgC+a++++k ++ +k+ v++++++HnH ++ XP_028059573.1 31 DFYNSYGGRLGFSIRRGYVNKS-KDGQITSRQFVCNKEGFRVVDKRD-SLTKNPRQEVRTGCQARVVIKWDRnIQKFFVSDFVEQHNHIFV 119 6******************9.7788************9999.99***************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 811 aa Download sequence
MEPNNHENDG GECYWKPRVR MTFDTEQEAY DFYNSYGGRL GFSIRRGYVN KSKDGQITSR 60 QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARVVIKWDR NIQKFFVSDF VEQHNHIFVP 120 IECTHMLPSQ RKISTPQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR 180 TKRQNSLAYR EAGSILQYFC DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD 240 VVTFDTTYKL NSAHRPFASF VGLNHHRETV VFGAALMYDE TVDSFVWLFR RFLEAMSSKA 300 PKIIFTDQDA AMAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDKAMK DKGMKSVLYT 360 FMYDIKDEEE FMLKLEKMLD KYEVRDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE 420 SFNAFLKDFI QSDHNLMQFF MHFDRVLSEK RYKELQAEYA LCQKLARVNI KVKIMEQAAD 480 VYTNKIFEEF QDEYVKNLEV NIEEIENDGE STVYTVLDSD GIKVRKVRQG CDDSVTCNCR 540 KFEIKGILCS HCLKILRERL KLKEIPSQYI LKRWTKKARS ENVKDRCGHD IQVDIRLHQT 600 SRYRSLMAIF RSVACRASES DETYNLTVEK ADELIADIET MLSAKFNMPC SDTIQQESPP 660 NACPESFGVD GVADKNVVQA KGLKRKECTS KGQRRTKGGL ELALAKKNKT SSHNASQTSM 720 SVTPQTPPLF STSAPEAPPL IRQSAPLFSS VPQLPPFSPS VPQVRASSSQ FMYPSKFSSS 780 QYAFFNAIDV LYGRGRGHGR GHGDVDHTPT S

Sequence ? help Back to Top

Protein Sequence Length: 811 aa Download sequence

MEPNNHENDG GECYWKPRVR MTFDTEQEAY DFYNSYGGRL GFSIRRGYVN KSKDGQITSR  60
QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARVVIKWDR NIQKFFVSDF VEQHNHIFVP  120
IECTHMLPSQ RKISTPQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYR EAGSILQYFC DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGLNHHRETV VFGAALMYDE TVDSFVWLFR RFLEAMSSKA  300
PKIIFTDQDA AMAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDKAMK DKGMKSVLYT  360
FMYDIKDEEE FMLKLEKMLD KYEVRDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE  420
SFNAFLKDFI QSDHNLMQFF MHFDRVLSEK RYKELQAEYA LCQKLARVNI KVKIMEQAAD  480
VYTNKIFEEF QDEYVKNLEV NIEEIENDGE STVYTVLDSD GIKVRKVRQG CDDSVTCNCR  540
KFEIKGILCS HCLKILRERL KLKEIPSQYI LKRWTKKARS ENVKDRCGHD IQVDIRLHQT  600
SRYRSLMAIF RSVACRASES DETYNLTVEK ADELIADIET MLSAKFNMPC SDTIQQESPP  660
NACPESFGVD GVADKNVVQA KGLKRKECTS KGQRRTKGGL ELALAKKNKT SSHNASQTSM  720
SVTPQTPPLF STSAPEAPPL IRQSAPLFSS VPQLPPFSPS VPQVRASSSQ FMYPSKFSSS  780
QYAFFNAIDV LYGRGRGHGR GHGDVDHTPT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-113	FAR1 family protein