PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059824.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 380aa MW: 42613.8 Da PI: 9.8257

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	72	6.5e-23	20	85	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL++l+++flkl+++ + + l+++a++L v +rRRiYDi+N+Le+++++++k+kn++ wkg XP_028059824.1 20 RKEKSLGVLCTNFLKLYNRDGVESIGLDDAANQL---GV--ERRRIYDIVNILESVGVLSRKAKNQYFWKG 85 79***************999********.....****************************98 PP
2	E2F_TDP	72.1	6.1e-23	145	229	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+ + ++l+++a++L+ + + k+RR+YDi+NV++++nliek ++k+++rw g XP_028059824.1 145 RKEKSLGLLTQNFIKLFICSSVDLISLDTAATALLGDihdptamrnNSAAKVRRLYDIANVFSSMNLIEKthhpeSRKPAFRWLG 229 79**************************************999977789***************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MSSLPPPPES QTRNPYYYSR KEKSLGVLCT NFLKLYNRDG VESIGLDDAA NQLGVERRRI 60 YDIVNILESV GVLSRKAKNQ YFWKGFGAIP QALDQLKEEA LRENFSTSGC FHSANASSEN 120 HKGGPSNSKT DRQEKSSASC KVDNRKEKSL GLLTQNFIKL FICSSVDLIS LDTAATALLG 180 DIHDPTAMRN NSAAKVRRLY DIANVFSSMN LIEKTHHPES RKPAFRWLGL KGSPKNGHAT 240 SLDLNESRKR MFGTEITNTL PKKYKTDSAL DCNSNQNADM PTHKRRSNLK DEHGRNSTEQ 300 QGKHSSKGFV FGPFTPANMP KVGDSENKNA RRVQGLEDLA SSYRPLYRNQ ALSDLFGHYV 360 EAWKSWYDEV AGKKQIQEVS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MSSLPPPPES QTRNPYYYSR KEKSLGVLCT NFLKLYNRDG VESIGLDDAA NQLGVERRRI  60
YDIVNILESV GVLSRKAKNQ YFWKGFGAIP QALDQLKEEA LRENFSTSGC FHSANASSEN  120
HKGGPSNSKT DRQEKSSASC KVDNRKEKSL GLLTQNFIKL FICSSVDLIS LDTAATALLG  180
DIHDPTAMRN NSAAKVRRLY DIANVFSSMN LIEKTHHPES RKPAFRWLGL KGSPKNGHAT  240
SLDLNESRKR MFGTEITNTL PKKYKTDSAL DCNSNQNADM PTHKRRSNLK DEHGRNSTEQ  300
QGKHSSKGFV FGPFTPANMP KVGDSENKNA RRVQGLEDLA SSYRPLYRNQ ALSDLFGHYV  360
EAWKSWYDEV AGKKQIQEVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-118	E2F/DP family protein