PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059889.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 357aa    MW: 40239.9 Da    PI: 5.9929
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.35e-0892127238
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCske 38 
                     fYn+YAk  GFs+rks+ +++ ++g++++r + Cske
  XP_028059889.1  92 FYNAYAKAKGFSIRKSRFNTN-KQGKVVSRPWLCSKE 127
                     9****************9999.6666999******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MAPAEVKREG DDYDIPNEAD DIRLINESGA KPYHGCEAGP SNEEATNMNV ENGGADVKQE  60
MVDDAHRNDM VGDVERALLE QIFDSAEDGD AFYNAYAKAK GFSIRKSRFN TNKQGKVVSR  120
PWLCSKEDAG EGGKYVVTHF VADHNHELAE QHCVMYLRSH RGLNSADKAQ AMAMRNVGVK  180
TSQIMDYMVN QSESYENVGF IRTNLHNHIQ AECRAEVEDD SKSRANYTKF GDVLRFDSTY  240
RTNAYKKPFV MLAGVTLHFT TTIFACVLLA NETIDTHTWV LETFMEAMGN KAPVSVLTDG  300
DKAMREAIRR VFSDTRHRLG NWHLRKNAVS NIHKSGFAHA FKQCMDMERD EAKFEDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-39FAR1 family protein