PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028059913.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 330aa MW: 37210.9 Da PI: 4.9144

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028059913.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	124	175	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+ +N+ ++ Lr l+P + + ++ + a+i A++Y+k+L+ XP_028059913.1 124 QRMTHIAVERNRRKLMNEYLSSLRGLMPDS---YVQRGDQASIIGGAINYVKELE 175 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MALEAVVAQQ ELYGYNTTDL YDLLQGNWGC EFGLAEKEEE CDSFDILENQ TENFDYANWN 60 SPPSSFVVPY WEQWCPNSSS DLDISTSIVP EELHHLDTST MAMSTRPKRR RSKSKKNKEE 120 IENQRMTHIA VERNRRKLMN EYLSSLRGLM PDSYVQRGDQ ASIIGGAINY VKELEQKLQF 180 LGGQKHMNPK FEAGSSSSSA SSSSSPFAEF FTFPQYSTSL GSCENSIMVT ELACAENHSA 240 IADIEVTMVE SHANLKIRSK KRPKQLLKMV SGFQKLRLTI LHLNVTTVDQ VVLYSLSVKV 300 EDDCNLTSVD EIATAVNQML GRIQQDAVLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	116	RRSKSKK
2	125	136	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-76	bHLH family protein