PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060144.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 147aa    MW: 17004.5 Da    PI: 10.3086
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3741.7e-2315114197
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+kv t+sd  +  rl +pk  a++h      +  + ++  l +ed +g++W++k++++k+s++yvlt+ W++Fvk+++L +gD+v F ++  s+
  XP_028060144.1  15 FDKVVTRSDIKEY-RLAIPKYQAKKHfpqhvaS--SSKGAFLCMEDNEGKVWRFKYSFWKRSQGYVLTREWNQFVKEKRLSAGDVVSFLRSTGSD 106
                     7788877666666.6************988532..346778************************************************886688 PP

                     E..EEEEE CS
              B3  90 felvvkvf 97 
                     ++l++  +
  XP_028060144.1 107 KQLYIDCR 114
                     88888766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MKEGMLLFPR QEKLFDKVVT RSDIKEYRLA IPKYQAKKHF PQHVASSSKG AFLCMEDNEG  60
KVWRFKYSFW KRSQGYVLTR EWNQFVKEKR LSAGDVVSFL RSTGSDKQLY IDCRPQNQSG  120
IAAKTEPVET TQNGQTVKLF GVNISTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.14e-40RAV family protein