PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060341.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 369aa MW: 41310.2 Da PI: 6.4207

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+t+++ g+ R++k+c++rw +yl XP_028060341.1 14 KGLWSPEEDEKLFNYITRFGVGCWSTVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.2	1.1e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_028060341.1 67 RGMFSEQEEDLILSLHEALGNR-WAQIAAQLP-GRTDNEVKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGGQSLCVKP KLRKGLWSPE EDEKLFNYIT RFGVGCWSTV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SEQEEDLILS LHEALGNRWA QIAAQLPGRT DNEVKNFWNS CLKKKLMKQG 120 IDPNTHKPIN DAEVRDGKTC TEKSSPTSPK LRGLGIVSAS AEIDQAFHVN NSTSTYYDGG 180 LTKSSREPFG SKPIFDPLLL YEFQGSVDPI GYNSNLLVTQ YQQTLRPYDQ NHLEVSPNFG 240 FNSMPNLTNF DHGNMGETDF SDNSTSRMSS LLFNDAKESS SNSSIVSSHT CFQMKNVVEN 300 AAFAWGTDNK LGPVFQCELN NGIKSEELNQ SPWPERQLHT HNSDDFSSYP LMSLSEDPTG 360 ASVGVFQHI

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGGQSLCVKP KLRKGLWSPE EDEKLFNYIT RFGVGCWSTV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SEQEEDLILS LHEALGNRWA QIAAQLPGRT DNEVKNFWNS CLKKKLMKQG  120
IDPNTHKPIN DAEVRDGKTC TEKSSPTSPK LRGLGIVSAS AEIDQAFHVN NSTSTYYDGG  180
LTKSSREPFG SKPIFDPLLL YEFQGSVDPI GYNSNLLVTQ YQQTLRPYDQ NHLEVSPNFG  240
FNSMPNLTNF DHGNMGETDF SDNSTSRMSS LLFNDAKESS SNSSIVSSHT CFQMKNVVEN  300
AAFAWGTDNK LGPVFQCELN NGIKSEELNQ SPWPERQLHT HNSDDFSSYP LMSLSEDPTG  360
ASVGVFQHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	4e-76	MYB family protein