PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060360.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 240aa    MW: 27419.8 Da    PI: 8.5929
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483e-15172221355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  XP_028060360.1 172 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFHG 221
                     9***************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MSWIYYAFRG HEVYQTPFKE GTKEAQVSDC NLQLPNMAED DFSVMKNWVS RNYYPASHAL  60
DNGVESGSPW RERKEGLRSL IRSRLSIGSP LIHLDRGLHS IEVSQGGYDM EAKAARAYDL  120
AALKYWGPST HINFPLENYQ QELEHMKNMT RQEYVAHLRR KSSGFSRGAS MYRGVTRHHQ  180
HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFH GVSAVTNFDL MGIVYSFCIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.16e-61AP2 family protein