PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060423.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 256aa    MW: 28777.4 Da    PI: 7.2984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78e-20122171255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    r +r++lg+f tae Aa+a+++a+ +++g
  XP_028060423.1 122 NYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFETAEAAARAYDKAAIEFRG 171
                     59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MQQKSPKRLK HGGASTSYPT PPQQQPEPPR LTREQEASVM VAALKNVIAG GTAIDMTHEF  60
RLFEFTTTTT AIATTDQERP LFPVPDPDTC QFCKIKGCLG CNFFPPTQED KKGTAPKKKK  120
KNYRGVRQRP WGKWAAEIRD PRRAARVWLG TFETAEAAAR AYDKAAIEFR GPRAKLNFPF  180
PDDITLLNQS QSSQAEQEIP AKRELAAEME AGPSKENEFW EVIEEREIEE WMMTMMDFSR  240
GDSSDSTTGN AQSSSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.19e-31ERF family protein