PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060518.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 591aa MW: 69340.7 Da PI: 7.038

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.3	7.3e-25	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ + ++++r+e rtgC+a+l++k ++ +k+ v++++++HnH ++ XP_028060518.1 31 DFYNTYGGRLGFSIRRGYVNKS-KDGQITSRQFVCNKEGFRVVDKRD-SLTKNPRQEVRTGCQARLVIKWDRnIQKFFVSDFVEQHNHIFV 119 6******************9.7788************9999.99***************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MEPNNHENDG GECDWKPKVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKDGQITSR 60 QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP 120 AECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR 180 TKRQNSLAYR EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITSIFWADAQ MIMDYEQFGD 240 VVTFDTTYKL NSAHRPFASF LGFNHHRETV IFGATLMYDE TADSFVWLFR RFLEAMSSKA 300 PKTIFTDQDA AMAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDNAVK DKGMKSVLST 360 FMYDIEDEEE FTLKWEEMLD KYEVRDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE 420 SFNAFLKDFI QSDHNLMQFF MHFDRVLFEK RYKELQAEYA LCQKLPRVNI KVKIMEQAVD 480 VYTNKIFEEF QDEYVKSLEV NIEEIENDGD STIYTVLDSD GIKVRKVRQE CDDSVTCNCR 540 KFEMKGILCS HCLKILRERL KFKEIPSQYI LKRWTKKARS ENVKDRCGHD I

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MEPNNHENDG GECDWKPKVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKDGQITSR  60
QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP  120
AECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYR EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITSIFWADAQ MIMDYEQFGD  240
VVTFDTTYKL NSAHRPFASF LGFNHHRETV IFGATLMYDE TADSFVWLFR RFLEAMSSKA  300
PKTIFTDQDA AMAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDNAVK DKGMKSVLST  360
FMYDIEDEEE FTLKWEEMLD KYEVRDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE  420
SFNAFLKDFI QSDHNLMQFF MHFDRVLFEK RYKELQAEYA LCQKLPRVNI KVKIMEQAVD  480
VYTNKIFEEF QDEYVKSLEV NIEEIENDGD STIYTVLDSD GIKVRKVRQE CDDSVTCNCR  540
KFEMKGILCS HCLKILRERL KFKEIPSQYI LKRWTKKARS ENVKDRCGHD I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-128	FAR1 family protein