PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060781.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 253aa    MW: 28729.4 Da    PI: 7.7919
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060781.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR178.11.7e-2486172290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      Yn+YA ++GFs+rk k ++ + +++i +++f Cskeg++ +e+   ek++ +r etrtgCka +++  e dg w+vt ++ eHnHela
  XP_028060781.1  86 LYNNYALRMGFSIRKGKPRYYSGSKNIRQHQFLCSKEGFKVDEDPC-EKKKLNRLETRTGCKAFIRLIVE-DGIWRVTAFNPEHNHELA 172
                     6******************999*******************99988.99999***************999.****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGLQGLMLAS EMKSPKSPSV GESNDDNQSK NFDIKSSSSL DIFSEINTSS DAERSEHNCM  60
FVARQENSDD SLLDKVVCSE DEEYALYNNY ALRMGFSIRK GKPRYYSGSK NIRQHQFLCS  120
KEGFKVDEDP CEKKKLNRLE TRTGCKAFIR LIVEDGIWRV TAFNPEHNHE LALQSERHLL  180
RSACHISKLK AGVIDSMVNA GISTKNAYPY LREEVRGNEN VGFTKRDCYN YVNKQKMMMT  240
SAGDAQSLLN HLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-26FAR1 family protein