PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060813.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 355aa    MW: 39471.7 Da    PI: 4.5862
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding513.3e-1695135547
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++ E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
   XP_028060813.1  95 SEYEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 135
                      6779**************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MEIEDQAQRN DSHIVNILGI FSINVESSSS SPVVSDTKSI LKLSSSHGFV SNLADEDEDK  60
DVGVFDRRRL LRCGKSCRLR WTNYLRPDLK RGLLSEYEEK MVIDLHAQLG NRWSKIASHL  120
PGRTDNEIKN HWNTHIKKKL RKMGIDPLTH KPLPTTPTHD HQFQQQPHDQ QQEQSLPEPV  180
PSLSEVGQNK EIETILFESS ITDTEAKEEG PFNSMEVNNG FSTDEVPLIE PHEINLVPCV  240
PSVPLIEPHD INLVPCVPSS SSSPSSSSSS TITSSSSSSS SSSSSSSSSH FSSSNILEEL  300
ELPTFEWGMG FWDDDFSNAL DLLISGADNW NATVEPLPPP TPTQYPTRMV LDQES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.12e-49MYB family protein