PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060827.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 144aa    MW: 16292.2 Da    PI: 5.0919
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB167.12.2e-52398297
           NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                     eqdr+lPianv+rimk++lP  akisk+aket+qec+sefisfvt+easdkc++e+rkt+ngdd++wal++lGf+dy+e++  yl+kyre+e+ek
  XP_028060827.1  3 DEQDRLLPIANVGRIMKQILPPSAKISKEAKETMQECASEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDDYAEAIVRYLHKYREFEREK 98
                    69*******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MVDEQDRLLP IANVGRIMKQ ILPPSAKISK EAKETMQECA SEFISFVTGE ASDKCHKENR  60
KTVNGDDICW ALSSLGFDDY AEAIVRYLHK YREFEREKAN QNKASSSTED KDEASNYKGN  120
IQLSKHTDSP TPLEFRVLEK GESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.11e-60NF-YB family protein