PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060846.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 500aa MW: 57568 Da PI: 7.0811

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5e-20	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks +++ ++g++++r + Cs+eg+r + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028060846.1 92 FYNAYAKAKGFSIRKSIFNTN-KEGKVVSRLWLCSREGQRLLIYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHELA 185 9*************99998.66669999******98766655799999************987677789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MARAEVKKEG DDYDIPNEAD DIRLMNESRV EPYHGCEAGP SNEKTTNMNV EDGGADVKKE 60 MVDDAHGNVM VGDVERAILE QKFDSIKDGE AFYNAYAKAK GFSIRKSIFN TNKEGKVVSR 120 LWLCSREGQR LLIYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH 180 NHELAEQHCV MYLRSHRSLN SADKAQAMAM RNIGVKTSQI MDYMINQSGS YENVGFVRTD 240 LHNHIQAERR AEVEDGDAQD SKSRADYAKF GDVLIFDSTY RTSAYKKPFV MFAGMTSHFR 300 TTIFACVLLA NETIETYTWV LETFMEAMGN KAPVSVLTDG DKAMREAIRR CMDMETDETK 360 FEHGWTTMVE KFGLQTNSWV LETYENRHMW AEAYMRGHFF AGMKSTQHSE CMNAYFNPFL 420 QHKLKLYEFV RHYDRALARI RYNEARDDAC GGRIMERSDG MYLWKTDINR LYPTTAGSRI 480 EYMCRIKYKY LRPNKGKDND

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MARAEVKKEG DDYDIPNEAD DIRLMNESRV EPYHGCEAGP SNEKTTNMNV EDGGADVKKE  60
MVDDAHGNVM VGDVERAILE QKFDSIKDGE AFYNAYAKAK GFSIRKSIFN TNKEGKVVSR  120
LWLCSREGQR LLIYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH  180
NHELAEQHCV MYLRSHRSLN SADKAQAMAM RNIGVKTSQI MDYMINQSGS YENVGFVRTD  240
LHNHIQAERR AEVEDGDAQD SKSRADYAKF GDVLIFDSTY RTSAYKKPFV MFAGMTSHFR  300
TTIFACVLLA NETIETYTWV LETFMEAMGN KAPVSVLTDG DKAMREAIRR CMDMETDETK  360
FEHGWTTMVE KFGLQTNSWV LETYENRHMW AEAYMRGHFF AGMKSTQHSE CMNAYFNPFL  420
QHKLKLYEFV RHYDRALARI RYNEARDDAC GGRIMERSDG MYLWKTDINR LYPTTAGSRI  480
EYMCRIKYKY LRPNKGKDND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-59	FAR1 family protein